Bangladesh surface water January 2011 - SRA

SRX699557: Bangladesh surface water January 2011
1 ILLUMINA (Illumina HiSeq 2000) run: 7M spots, 1.4G bases, 811.6Mb downloads

Design: A whole genome shotgun library was prepared using the Nextera DNA library preparation kit (Illumina) from DNA extracted from 3 Bara Haldia surface water samples collected January 2011 (C1-3, IEP3 and IEP5).

Submitted by: University of Tennessee

Study: Bangladesh Surface and Ground Water Metagenomes

PRJNA260804 • SRP047074 • All experiments • All runs

show Abstracthide Abstract

Drinking water in parts of Bangladesh may be contaminated with arsenic and/or water-borne pathogens. Metagenomes from surface water and ground water samples were generated to provide genetic information on microbial arsenic metabolic pathways and to search for potential water-borne pathogens.

Sample: surface water November 2011

SAMN03014532 • SRS699410 • All experiments • All runs

Organism: aquatic metagenome

Library:

Name: BaraHaldiaSW0111

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 7M spots, 1.4G bases, 811.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1573579	6,956,743	1.4G	811.6Mb	2014-10-01

ID:: 985211

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity